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FRODOCK other resources

Written on 07 February 2017.

3rd party useful tools


  • Molprobity Online structure validation tool.
  • pdb2pqr Tool for preparing structures, assigning charge and radius parameters from a variety of force fields, etc.
  • Jackal Includes profix tool a nice tool for fix pdbs.

Other protein-protein docking programs


 

  • ICM
  • pyDock
  • ZDOCK
  • HEX
  • HADDOCK
  • FTDOCK/3Ddock
  • GRAMM-X
  • PIPER
  • BIGGER
  • Rosettadock

 

  • Multiscale Simulations
  • Hybrid methods for EM
  • Protein Modeling
    • FRODOCK
      • Getting Started
      • Tutorial
      • Tips and tricks
      • Other resources
      • Download
    • RCD loop modeling
    • KORP
    • KORP-PL
    • DALAI_GA
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