All Protein Modeling Multiscale Dynamics Hybrid Methods For EM ilMode Constrained NMA for loop modeling KORPM Stability prediction upon mutation KORP Orientational coarse-grained potential for protein & loop modeling RCD+ Efficient loop closure engine included in the server rcd.chaconlab.org protein loop prediction iMODFIT Flexible fitting of atomic structures into EM maps KORP-PL Effective coarse-grained knowledge-based scoring function for protein-ligand interactions FRODOCK Structural prediction of protein-protein interactions iMOD Normal Mode Analysis in internal coordinates Dalai-GA SAXS Ab initio 3D modeling of solution scattering profiles Situs Program package for the modeling and refinement of multi-scale biomolecular EM structures (external Wriggers' lab) ADP_EM Ultra fast multiresolution rigid-body fitting tool using spherical harmonics
