Web Servers.
iMODS
To explore the collective motions of proteins and nucleic acids using NMA in internal coordinates (torsional space) just submit the PDB-ID or the atomic coordinates in PDB format (3.x).
RCD+
RCD+ server is a fast loop-closure modeling tool based on an improved version of our RCD method. Accurate all-atom loop predictions and ensembles can be easily generated in a few minutes.
FRODOCK
Predict protein-protein interactions using our Fast Rotational DOCKing method. It efficiently generates potential interaction models from the 3D coordinates of two proteins.
AbRaCD
AbRaCD is a sampling-based web server for ab initio prediction of antibody complementarity-determining region (CDR) loops, designed to capture antibody-specific conformational features.
